MolNFT v1 · #150262 · protein
Methylesterase BT1017
6GOC · DUF3826 domain-containing protein: “Methylesterase BT1017”. X-ray diffraction, 1 ligand (ZN), 2 pockets (best druggability 0.28). MolNFT v1 #150262 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GOC
- Type
- protein
- Length
- 444 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DUF3826 domain-containing protein
- UniProt
- A0A0P0F0R1
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.28
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DUF3826 domain-containing protein | protein | 444 | 44% helix, 19% strand | A0A0P0F0R1 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.28 | 0.75 | 17 | empty |
| 2 | 53 | 0.25 | 0.73 | 13 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 6GOC · Methylesterase BT1017 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0P0F0R1
- Elsewhere: RCSB PDB 6GOC · PDBe 6GOC · UniProt A0A0P0F0R1
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