MolNFT v1 · #149956 · protein
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from a. thaliana in complex with D-chiro-IP6 and ADP
6GFG: “Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from a. thaliana in complex with D-chiro-IP6 and ADP”. X-ray diffraction, 4 ligands (KGN, ADP, MG). MolNFT v1 #149956 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GFG
- Type
- protein
- Length
- 840 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A178UAB5
- Ligands
- KGN, ADP, MG, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | — | protein | 420 | — | A0A178UAB5 |
Ligands and binding sites
- KGN · D-chiro inositol hexakisphosphate · ligand · 2 copies · chains B, A
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains B, A
- MG · Magnesium ion · metal · 4 copies · chains B, A
- ZN · Zinc ion · metal · 2 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GFG · Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from A. thaliana in complex with… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A178UAB5
- Elsewhere: RCSB PDB 6GFG · PDBe 6GFG · UniProt A0A178UAB5
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