MolNFT v1 · #149951 · protein
Structure of nucleotide binding domain of HSP110, ATP and MG2+ complexed
6GFA · Heat shock protein 105 kda: “Structure of nucleotide binding domain of HSP110, ATP and MG2+ complexed”. X-ray diffraction, 2 ligands (ATP, MG), 1 pocket (best druggability 0.82). MolNFT v1 #149951 on GenesisL1: 3D structure, binding…
- PDB
- 6GFA
- Type
- protein
- Length
- 378 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Heat shock protein 105 kda
- UniProt
- Q92598
- Ligands
- ATP, MG
- Pockets
- 1 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Heat shock protein 105 kda | protein | 378 | 41% helix, 28% strand | Q92598 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 685 | 0.82 | 0.86 | 77 | MG, ATP |
Compared structures
- 6GFA · Structure of Nucleotide binding domain of HSP110, ATP and Mg2+ complexed · the same entry in another collection · chain A against A, TM-score 1.00
- Q92598 · AlphaFold monomer V2.0 prediction for heat shock protein 105 kda (Q92598) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92598
- Elsewhere: RCSB PDB 6GFA · PDBe 6GFA · UniProt Q92598
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