MolNFT v1 · #149945 · protein
The structure of the ubiquitin-like modifier FAT10 reveals a novel targeting mechanism for degradation by the 26S proteasome
6GF2 · Ubiquitin D: “The structure of the ubiquitin-like modifier FAT10 reveals a novel targeting mechanism for degradation by the…”. Solution nmr, 1 pocket (best druggability 0.31). MolNFT v1 #149945 on GenesisL1: 3D structure, binding…
- PDB
- 6GF2
- Type
- protein
- Length
- 85 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin D
- UniProt
- O15205
- Pockets
- 1 · best druggability 0.31
Structure
solution nmr · 1 distinct chain · 21% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin D | protein | 85 | 21% helix, 28% strand | O15205 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.31 | 0.76 | 14 | empty |
Compared structures
- 6GF2 · The structure of the ubiquitin-like modifier FAT10 reveals a novel targeting mechanism… · the same entry in another collection · chain A against A, TM-score 1.00
- O15205 · AlphaFold monomer V2.0 prediction for ubiquitin D (O15205) · a predicted model of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O15205
- Elsewhere: RCSB PDB 6GF2 · PDBe 6GF2 · UniProt O15205
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