MolNFT v1 · #149566 · protein
Crystal structure of the periplasmic domain of tgpa from pseudomonas aeruginosa
6G49 · Protein-glutamine gamma-glutamyltransferase: “Crystal structure of the periplasmic domain of tgpa from pseudomonas aeruginosa”. X-ray diffraction, 2 ligands (PO4, CL), 2 pockets (best druggability 0.50). MolNFT v1 #149566 on…
- PDB
- 6G49
- Type
- protein
- Length
- 288 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein-glutamine gamma-glutamyltransferase
- EC
- 2.3.2.13
- UniProt
- Q9HZX3
- Ligands
- PO4, CL
- Pockets
- 2 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein-glutamine gamma-glutamyltransferase (EC 2.3.2.13) | protein | 288 | 28% helix, 30% strand | Q9HZX3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 209 | 0.50 | 0.76 | 28 | empty |
| 2 | 64 | 0.45 | 0.82 | 21 | empty |
Compared structures
- 6G49 · Crystal structure of the periplasmic domain of TgpA from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
- Q9HZX3 · AlphaFold monomer V2.0 prediction for protein-glutamine gamma- glutamyltransferase… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HZX3
- Elsewhere: RCSB PDB 6G49 · PDBe 6G49 · UniProt Q9HZX3
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