MolNFT v1 · #149358 · DNA
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (major species)
6FY6 · DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')…: “Concerted dynamics of metallo-base pairs in an A/B-form helical transition (major species)”. Solution nmr, 1 ligand (HG). MolNFT v1 #149358 on GenesisL1: 3D structure…
- PDB
- 6FY6
- Type
- DNA
- Length
- 28 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3') _major
- Ligands
- HG
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3') _major | dna | 14 | — | — |
Ligands and binding sites
- HG · Mercury (II) ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 641 Ų buried · 48 hydrogen bonds · nucleic-nucleic
Compared structures
- 6FY6 · Concerted dynamics of metallo-base pairs in an A/B-form helical transition (major species) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6FY6 · PDBe 6FY6
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