MolNFT v1 · #149352 · protein
Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection, CAP228-16H, bound to a heterologous V2 peptide
6FY0: “Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection, CAP228-16H, bound to a…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #149352 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FY0
- Type
- protein
- Length
- 895 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- SO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 226 | — | — |
| L | — | protein | 211 | — | — |
| M | — | protein | 208 | — | — |
| I | — | protein | 216 | — | — |
| A, P | — | protein | 17 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains H, P, I, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FY0 · Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection… · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6FY0 · PDBe 6FY0
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