MolNFT v1 · #149184 · protein
Crystal structure of E.COLI bama beta-barrel with a C-terminal extension
6FSU · Outer membrane protein assembly factor bama: “Crystal structure of E.COLI bama beta-barrel with a C-terminal extension”. X-ray diffraction, 9 pockets (best druggability 0.73). MolNFT v1 #149184 on GenesisL1: 3D structure, binding…
- PDB
- 6FSU
- Type
- protein
- Length
- 775 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein assembly factor bama
- UniProt
- P0A942
- Pockets
- 9 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 6% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein assembly factor bama | protein | 388 | 7% helix, 54% strand | P0A942 |
| B | Outer membrane protein assembly factor bama | protein | 387 | 6% helix, 53% strand | P0A942 |
Pockets
9 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1173 | 0.73 | 0.75 | 85 | empty |
| 2 | 50 | 0.70 | 0.98 | 24 | empty |
| 3 | 613 | 0.66 | 0.76 | 52 | empty |
| 4 | 646 | 0.66 | 0.76 | 55 | empty |
| 5 | 332 | 0.58 | 0.77 | 39 | empty |
Interfaces
1 interface between chains.
- A–B · 224 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 6FSU · Crystal structure of E.coli BamA beta-barrel with a C-terminal extension · the same entry in another collection · chain A against A, TM-score 1.00
- P0A942 · AlphaFold monomer V2.0 prediction for outer membrane protein assembly factor bama (P0A942) · a predicted model of the same protein · chain B against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A942
- Elsewhere: RCSB PDB 6FSU · PDBe 6FSU · UniProt P0A942
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