MolNFT v1 · #148883 · protein
Adenovirus species 48, fiber knob protein
6FJQ: “Adenovirus species 48, fiber knob protein”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #148883 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FJQ
- Type
- protein
- Length
- 390 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fiber
- UniProt
- A4ZKK6
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Fiber | protein | 195 | 8% helix, 38% strand | A4ZKK6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 5 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 3 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 265 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 6FJQ · Adenovirus species 48, fiber knob protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4ZKK6
- Elsewhere: RCSB PDB 6FJQ · PDBe 6FJQ · UniProt A4ZKK6
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