MolNFT v1 · #148873 · protein
Structure of D80A-fructofuranosidase from xanthophyllomyces dendrorhous complexed with fructose and 4-nitrophenol
6FJG: “Structure of D80A-fructofuranosidase from xanthophyllomyces dendrorhous complexed with fructose and…”. X-ray diffraction, 5 ligands (NPO, NAG, MAN). MolNFT v1 #148873 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FJG
- Type
- protein
- Length
- 1,248 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- J7HDY4
- Ligands
- NPO, NAG, MAN, BMA, FRU
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 624 | — | J7HDY4 |
Ligands and binding sites
- NPO · P-nitrophenol · ligand · 4 copies · chains A, B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 39 copies · chains A, B
- MAN · alpha-D-mannopyranose · sugar · 19 copies · chains A, B
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains A, B
- FRU · beta-D-fructofuranose · sugar · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 23 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FJG · Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J7HDY4
- Elsewhere: RCSB PDB 6FJG · PDBe 6FJG · UniProt J7HDY4
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