DDR1, 1-(1H-indazole-5-carbonyl)-5'-methoxy-1'-[2-oxo-2-[(2S)-2- (TRIFLUOROMETHYL)PYRROLIDIN-1-YL]ETHYL]SPIRO[PIPERIDINE-4,3'- PYRROLO[3,2-B]PYRIDINE]-2'-one, 1.790A, P212121, RFREE=23.8%

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 18% strand (DSSP).

Ligands and binding sites

• DJW · 1-(1~{H}-indazol-5-ylcarbonyl)-5'-methoxy-1'-[2-oxidanylidene-2-[(2~{S})-2-(trifluoromethyl) pyrrolidin-1-yl]ethyl]spiro[piperidine-4,3'-pyrrolo[3, 2-b]pyridine]-2'-one · ligand · chains A
• CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 6FIQ · DDR1, 1-(1H-indazole-5-carbonyl)-5'-methoxy-1'-[2-oxo-2-[(2S)-2-(trifluoromethyl)pyrrolidi… · the same entry in another collection · chain A against A, TM-score 1.00
• Q08345 · AlphaFold monomer V2.0 prediction for epithelial discoidin domain- containing receptor 1… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q08345
• Elsewhere: RCSB PDB 6FIQ · PDBe 6FIQ · UniProt Q08345