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MolNFT v1 · #148642 · protein

CHK1 kinase in complex with compound 13

6FCK · SERINE/THREONINE-protein kinase CHK1: “CHK1 kinase in complex with compound 13”. X-ray diffraction, 2 ligands (D4Z, SO4), 1 pocket (best druggability 0.65). MolNFT v1 #148642 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
6FCK
Type
protein
Length
269 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase CHK1
EC
2.7.11.1
UniProt
O14757
Ligands
D4Z, SO4
Pockets
1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 22% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASERINE/THREONINE-protein kinase CHK1 (EC 2.7.11.1)protein26937% helix, 22% strandO14757

Ligands and binding sites

  • D4Z · 2-phenyl-4-[[(3~{S})-piperidin-3-yl]amino]-1~{H}-indole-7-carboxamide · ligand · chains A
  • SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12250.650.8333D4Z

Compared structures

  • 6FCK · CHK1 kinase in complex with compound 13 · the same entry in another collection · chain A against A, TM-score 1.00
  • O14757 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase CHK1 (O14757) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • 2C3K · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.95
  • 2C3J · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.94
  • 2C3L · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

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