MolNFT v1 · #148352 · protein
Crystal structure of the GP37-GP38 adhesin tip complex of the bacteriophage S16 long tail fiber
6F45: “Crystal structure of the GP37-GP38 adhesin tip complex of the bacteriophage S16 long tail fiber”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #148352 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6F45
- Type
- protein
- Length
- 457 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- M1EBB2, M1EAS5
- Ligands
- MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | — | protein | 248 | — | M1EBB2 |
| A | — | protein | 68 | — | M1EAS5 |
| B | — | protein | 72 | — | M1EAS5 |
| C | — | protein | 69 | — | M1EAS5 |
Ligands and binding sites
- MG · Magnesium ion · metal · 6 copies · chains D, A, B, C
- MRD · (4R)-2-methylpentane-2,4-diol · additive · 5 copies · chains D, A, B, C
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 5 copies · chains D, A, B, C
- IMD · Imidazole · additive · 3 copies · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6F45 · Crystal structure of the gp37-gp38 adhesin tip complex of the bacteriophage S16 long tail… · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M1EBB2
- Every structure of UniProt M1EAS5
- Elsewhere: RCSB PDB 6F45 · PDBe 6F45 · UniProt M1EBB2 · UniProt M1EAS5
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