MolNFT v1 · #148233 · protein
Crystal structure of PIZZA6-ayw
6F0Q: “Crystal structure of PIZZA6-ayw”. X-ray diffraction, 4 pockets (best druggability 0.79). MolNFT v1 #148233 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6F0Q
- Type
- protein
- Length
- 502 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PIZZA6-ayw
- Pockets
- 4 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | PIZZA6-ayw | protein | 251 | 7% helix, 38% strand | — |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 623 | 0.79 | 0.85 | 68 | empty |
| 2 | 567 | 0.77 | 0.84 | 64 | empty |
| 3 | 61 | 0.38 | 0.79 | 19 | empty |
| 4 | 69 | 0.38 | 0.78 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 355 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 6F0Q · Crystal structure of Pizza6-AYW · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6F0Q · PDBe 6F0Q
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