MolNFT v1 · #147443 · protein
Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772
6ED7: “Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772”. X-ray diffraction, 2 ligands (J4J, PLP). MolNFT v1 #147443 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ED7
- Type
- protein
- Length
- 3,432 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0A0GYM0
- Ligands
- J4J, PLP
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H | — | protein | 429 | — | A0A0A0GYM0 |
Ligands and binding sites
- J4J · 2-[(2-nitrophenyl)sulfanyl]acetohydrazide · ligand · 16 copies · chains A, B, C, D, E, F, G, H
- PLP · Pyridoxal-5'-phosphate · ligand · 8 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ED7 · Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0A0GYM0
- Elsewhere: RCSB PDB 6ED7 · PDBe 6ED7 · UniProt A0A0A0GYM0
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