MolNFT v1 · #147414 · protein

VLM2 thioesterase domain wild type structure 2

6ECC: “VLM2 thioesterase domain wild type structure 2”. X-ray diffraction, 1 pocket (best druggability 0.56). MolNFT v1 #147414 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ECC
Type: protein
Length: 231 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: VLM2
EC: 3.1.2.-
UniProt: Q1PSF3
Pockets: 1 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	VLM2 (EC 3.1.2.-)	protein	231	42% helix, 16% strand	Q1PSF3

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	307	0.56	0.76	34	empty

Compared structures

6ECC · Vlm2 thioesterase domain wild type structure 2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q1PSF3
Elsewhere: RCSB PDB 6ECC · PDBe 6ECC · UniProt Q1PSF3

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