MolNFT v1 · #147327 · protein
The crystal structure of bovine ultralong antibody bov-5
6E9K · Bovine ultralong antibody bov-5 heavy chain: “The crystal structure of bovine ultralong antibody bov-5”. X-ray diffraction, 2 pockets (best druggability 0.51). MolNFT v1 #147327 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6E9K
- Type
- protein
- Length
- 460 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bovine ultralong antibody bov-5 heavy chain; Igl@ protein
- UniProt
- Q3T101
- Pockets
- 2 · best druggability 0.51
Structure
x-ray diffraction · 2 distinct chains · 8% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bovine ultralong antibody bov-5 heavy chain | protein | 246 | 6% helix, 54% strand | — |
| B | Igl@ protein | protein | 214 | 9% helix, 52% strand | Q3T101 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 313 | 0.51 | 0.73 | 38 | empty |
| 2 | 69 | 0.32 | 0.75 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 2065 Ų buried · 12 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 disulfide (disulfide).
Compared structures
- 6E9K · The crystal structure of bovine ultralong antibody BOV-5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3T101
- Elsewhere: RCSB PDB 6E9K · PDBe 6E9K · UniProt Q3T101
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.