MolNFT v1 · #147324 · protein

The crystal structure of bovine ultralong antibody bov-2

6E9G · Bovine ultralong antibody bov-2 heavy chain: “The crystal structure of bovine ultralong antibody bov-2”. X-ray diffraction, 7 pockets (best druggability 0.70). MolNFT v1 #147324 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 6E9G
Type: protein
Length: 461 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bovine ultralong antibody bov-2 heavy chain; Bovine ultralong antibody bov-2 light chain
UniProt: Q3T101
Pockets: 7 · best druggability 0.70

Structure

x-ray diffraction · 2 distinct chains · 7% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bovine ultralong antibody bov-2 heavy chain	protein	247	6% helix, 45% strand	—
B	Bovine ultralong antibody bov-2 light chain	protein	214	7% helix, 51% strand	Q3T101

Pockets

7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	60	0.70	0.97	19	empty
2	219	0.45	0.73	38	empty
3	113	0.38	0.75	28	empty
4	73	0.33	0.75	17	empty
5	78	0.33	0.75	18	empty

Interfaces

1 interface between chains.

A–B · 1935 Å² buried · 9 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 9 disulfide (disulfide).

Compared structures

6E9G · The crystal structure of bovine ultralong antibody BOV-2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3T101
Elsewhere: RCSB PDB 6E9G · PDBe 6E9G · UniProt Q3T101

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