MolNFT v1 · #147277 · RNA
Crystal structure of the corn aptamer in unliganded state
6E80: “Crystal structure of the corn aptamer in unliganded state”. X-ray diffraction, 4 ligands (IRI, MG, IR). MolNFT v1 #147277 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E80
- Type
- RNA
- Length
- 35 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- IRI, MG, IR, K
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 35 | — | — |
Ligands and binding sites
- IRI · Iridium hexammine ion · ligand · 3 copies · chains A
- MG · Magnesium ion · metal · 4 copies · chains A
- IR · Iridium ion · metal · 2 copies · chains A
- K · Potassium ion · metal · chains A
- ACT · Acetate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E80 · Crystal structure of the Corn aptamer in unliganded state · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6E80 · PDBe 6E80
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