MolNFT v1 · #147206 · protein
Crystal structure of human cellular retinol binding protein 3 in complex with abnormal-cannabidiol (abn-cbd)
6E5W: “Crystal structure of human cellular retinol binding protein 3 in complex with abnormal-cannabidiol (abn-cbd)”. X-ray diffraction, 1 ligand (HVD). MolNFT v1 #147206 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E5W
- Type
- protein
- Length
- 531 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P82980
- Ligands
- HVD
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 133 | — | P82980 |
| D | — | protein | 132 | — | P82980 |
Ligands and binding sites
- HVD · (1'R,2'R)-5'-methyl-6-pentyl-2'-(prop-1-en-2-yl)-1',2', 3',4'-tetrahydro[1,1'-biphenyl]-2,4-diol · ligand · 4 copies · chains A, B, C, D
- GOL · Glycerol · additive · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E5W · Crystal structure of human cellular retinol binding protein 3 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- P82980 · AlphaFold monomer V2.0 prediction for retinol-binding protein 5 (P82980) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P82980
- Elsewhere: RCSB PDB 6E5W · PDBe 6E5W · UniProt P82980
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