MolNFT v1 · #147182 · protein
Bacteroides ovatus mixed-linkage glucan utilization locus (mlgul) sgbp-B in complex with mixed-linkage heptasaccharide
6E57: “Bacteroides ovatus mixed-linkage glucan utilization locus (mlgul) sgbp-B in complex with mixed-linkage…”. X-ray diffraction, 3 ligands (BGC, NA, PO4). MolNFT v1 #147182 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E57
- Type
- protein
- Length
- 1,562 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A7LY28
- Ligands
- BGC, NA, PO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 399 | — | A7LY28 |
| B | — | protein | 385 | — | A7LY28 |
| C | — | protein | 390 | — | A7LY28 |
| D | — | protein | 388 | — | A7LY28 |
Ligands and binding sites
- BGC · beta-D-glucopyranose · sugar · 15 copies · chains A, C, D
- NA · Sodium ion · metal · 2 copies · chains A, C
- PO4 · Phosphate ion · ion · 14 copies · chains A, B, C, D
- EDO · 1,2-ethanediol · additive · 5 copies · chains A, D, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E57 · Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-B in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7LY28
- Elsewhere: RCSB PDB 6E57 · PDBe 6E57 · UniProt A7LY28
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