MolNFT v1 · #147167 · protein
Crystal structure of the drosophila melanogaster polypeptide N- acetylgalactosaminyl transferase PGANT9B
6E4R: “Crystal structure of the drosophila melanogaster polypeptide N- acetylgalactosaminyl transferase PGANT9B”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #147167 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E4R
- Type
- protein
- Length
- 999 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8MRC9
- Ligands
- NAG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 504 | — | Q8MRC9 |
| B | — | protein | 495 | — | Q8MRC9 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, B
- GOL · Glycerol · additive · 8 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
- PGE · Triethylene glycol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E4R · Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8MRC9 · AlphaFold monomer V2.0 prediction for putative polypeptide… · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8MRC9
- Elsewhere: RCSB PDB 6E4R · PDBe 6E4R · UniProt Q8MRC9
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