MolNFT v1 · #147083 · RNA
Crystal structure of a class I PREQ1 riboswitch complexed with PREQ1
6E1W · RNA (33-mer): “Crystal structure of a class I PREQ1 riboswitch complexed with PREQ1”. X-ray diffraction, 2 ligands (HNG, MG). MolNFT v1 #147083 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E1W
- Type
- RNA
- Length
- 32 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (33-mer)
- Ligands
- HNG, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (33-mer) | rna | 32 | — | — |
Ligands and binding sites
- HNG · 2-amino-5-(aminomethyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one · ligand · chains A
- MG · Magnesium ion · metal · chains A
- ACT · Acetate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E1W · Crystal structure of a class I PreQ1 riboswitch complexed with PreQ1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6E1W · PDBe 6E1W
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