MolNFT v1 · #146876 · protein

Wild-type lactate monooxygenase from mycobacterium smegmatis

6DVI: “Wild-type lactate monooxygenase from mycobacterium smegmatis”. X-ray diffraction, 2 ligands (FMN, SO4). MolNFT v1 #146876 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6DVI
Type: protein
Length: 2,306 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P21795
Ligands: FMN, SO4

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	—	protein	394	—	P21795
D	—	protein	338	—	P21795
E, F	—	protein	393	—	P21795

Ligands and binding sites

FMN · Flavin mononucleotide · ligand · 6 copies · chains A, B, C, D, E, F
SO4 · Sulfate ion · ion · 19 copies · chains A, B, C, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6DVI · Wild-type Lactate Monooxygenase from Mycobacterium smegmatis · the same entry in another collection · chain F against F, TM-score 1.00
P21795 · AlphaFold monomer V2.0 prediction for lactate 2-monooxygenase (P21795) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21795
Elsewhere: RCSB PDB 6DVI · PDBe 6DVI · UniProt P21795

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