MolNFT v1 · #146773 · protein
Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from bacteriophage T4
6DRT: “Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from…”. X-ray diffraction. MolNFT v1 #146773 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DRT
- Type
- protein
- Length
- 717 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04525, P00970
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 230 | — | P04525 |
| B | — | protein | 228 | — | P04525 |
| D, F | — | protein | 9 | — | P00970 |
| E | — | protein | 11 | — | P00970 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B, C, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DRT · Crystal structure of the processivity clamp GP45 complexed with recognition peptide of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04525
- Every structure of UniProt P00970
- Elsewhere: RCSB PDB 6DRT · PDBe 6DRT · UniProt P04525 · UniProt P00970
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