MolNFT v1 · #146725 · protein

Cronobacter sakazakii (enterobacter sakazakii) metallo-beta-lactamse harldq motif mutant S60

6DQ2 · Beta-lactamase: “Cronobacter sakazakii (enterobacter sakazakii) metallo-beta-lactamse harldq motif mutant S60”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.36). MolNFT v1 #146725 on GenesisL1: 3D structure…

PDB: 6DQ2
Type: protein
Length: 258 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-lactamase
UniProt: A0A0F6VWC7
Ligands: PO4
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-lactamase	protein	258	30% helix, 23% strand	A0A0F6VWC7

Ligands and binding sites

PO4 · Phosphate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	79	0.36	0.76	23	PO4

Compared structures

6DQ2 · Cronobacter sakazakii (Enterobacter sakazakii) Metallo-beta-lactamse HARLDQ motif mutant… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0F6VWC7
Elsewhere: RCSB PDB 6DQ2 · PDBe 6DQ2 · UniProt A0A0F6VWC7

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