MolNFT v1 · #146625 · protein

Cronobacter sakazakii (enterobacter sakazakii) metallo-beta-lactamse harldq motif

6DN4 · Beta-lactamase: “Cronobacter sakazakii (enterobacter sakazakii) metallo-beta-lactamse harldq motif”. X-ray diffraction, 2 pockets (best druggability 0.49). MolNFT v1 #146625 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 6DN4
Type: protein
Length: 275 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-lactamase
UniProt: A0A0F6VWC7
Pockets: 2 · best druggability 0.49

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-lactamase	protein	275	33% helix, 22% strand	A0A0F6VWC7

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.49	0.83	22	empty
2	64	0.40	0.80	16	empty

Compared structures

6DN4 · Cronobacter sakazakii (Enterobacter sakazakii) Metallo-beta-lactamse HARLDQ motif · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0F6VWC7
Elsewhere: RCSB PDB 6DN4 · PDBe 6DN4 · UniProt A0A0F6VWC7

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