MolNFT v1 · #146549 · protein

Crystal structure of arginase from bacillus subtilis

6DKT: “Crystal structure of arginase from bacillus subtilis”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #146549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6DKT
Type: protein
Length: 1,680 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P39138
Ligands: MN

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	—	protein	283	—	P39138
E	—	protein	268	—	P39138
F	—	protein	280	—	P39138

Ligands and binding sites

MN · Manganese (II) ion · metal · 12 copies · chains A, B, C, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6DKT · Crystal structure of Arginase from Bacillus subtilis · the same entry in another collection · chain F against F, TM-score 1.00
P39138 · AlphaFold monomer V2.0 prediction for arginase (P39138) · a predicted model of the same protein · chain C against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P39138
Elsewhere: RCSB PDB 6DKT · PDBe 6DKT · UniProt P39138

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.