MolNFT v1 · #146414 · protein
Crystal structure of human ppargamma ligand binding domain in complex with CAY10506
6DGQ: “Crystal structure of human ppargamma ligand binding domain in complex with CAY10506”. X-ray diffraction, 1 ligand (GBV). MolNFT v1 #146414 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DGQ
- Type
- protein
- Length
- 510 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P37231
- Ligands
- GBV
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 257 | — | P37231 |
| B | — | protein | 253 | — | P37231 |
Ligands and binding sites
- GBV · N-(2-{4-[(2,4-dioxo-3,4-dihydro-2H-1lambda~4~,3-thiazol-5-yl)methyl]phenoxy}ethyl)-5-[(3R)-1,2-dithiolan-3-yl]pentanamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DGQ · Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with CAY10506 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37231
- Elsewhere: RCSB PDB 6DGQ · PDBe 6DGQ · UniProt P37231
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