MolNFT v1 · #146388 · protein
Human diabetogenic TCR T1D3 in complex with DQ8-P8E9E peptide
6DFX: “Human diabetogenic TCR T1D3 in complex with DQ8-P8E9E peptide”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #146388 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DFX
- Type
- protein
- Length
- 1,615 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q30069, U3PYM0
- Ligands
- NAG
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 180 | — | Q30069 |
| B | — | protein | 200 | — | U3PYM0 |
| E | — | protein | 199 | — | U3PYM0 |
| G | — | protein | 194 | — | — |
| H, J | — | protein | 237 | — | — |
| I | — | protein | 188 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A, D
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DFX · human diabetogenic TCR T1D3 in complex with DQ8-p8E9E peptide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q30069
- Every structure of UniProt U3PYM0
- Elsewhere: RCSB PDB 6DFX · PDBe 6DFX · UniProt Q30069 · UniProt U3PYM0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.