MolNFT v1 · #146286 · protein

Crystal structure of selaginella moellendorffii hct

6DD2 · Probable hydroxycinnamoyl transferase: “Crystal structure of selaginella moellendorffii hct”. X-ray diffraction, 9 pockets (best druggability 0.82). MolNFT v1 #146286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6DD2
Type: protein
Length: 827 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable hydroxycinnamoyl transferase
EC: 2.3.1.-, 2.3.1.133
UniProt: D8T7G0
Pockets: 9 · best druggability 0.82

Structure

x-ray diffraction · 2 distinct chains · 26% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable hydroxycinnamoyl transferase (EC 2.3.1.-, 2.3.1.133)	protein	413	27% helix, 21% strand	D8T7G0
B	Probable hydroxycinnamoyl transferase (EC 2.3.1.-, 2.3.1.133)	protein	414	24% helix, 23% strand	D8T7G0

Pockets

9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	852	0.82	0.84	81	empty
2	798	0.81	0.84	86	empty
3	296	0.64	0.81	42	empty
4	61	0.60	0.91	21	empty
5	141	0.56	0.82	32	empty

Interfaces

1 interface between chains.

A–B · 680 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

6DD2 · Crystal structure of Selaginella moellendorffii HCT · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D8T7G0
Elsewhere: RCSB PDB 6DD2 · PDBe 6DD2 · UniProt D8T7G0

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.