MolNFT v1 · #146269 · protein
Structure of isonitrile biosynthesis enzyme scoe
6DCH · Scoe protein: “Structure of isonitrile biosynthesis enzyme scoe”. X-ray diffraction, 3 ligands (CHT, ZN, CL), 2 pockets (best druggability 0.83). MolNFT v1 #146269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DCH
- Type
- protein
- Length
- 296 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Scoe protein
- Ligands
- CHT, ZN, CL
- Pockets
- 2 · best druggability 0.83
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scoe protein | protein | 296 | 22% helix, 27% strand | — |
Ligands and binding sites
- CHT · Choline ion · ligand · chains A
- ZN · Zinc ion · metal · chains A
- CL · Chloride ion · ion · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.83 | 0.92 | 54 | ACT, CL, CHT |
| 2 | 77 | 0.33 | 0.75 | 18 | empty |
Compared structures
- 6DCH · Structure of isonitrile biosynthesis enzyme ScoE · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6DCH · PDBe 6DCH
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.