MolNFT v1 · #146136 · RNA
Group I self-splicing intron P4-P6 domain mutant A125U/G126U
6D8M: “Group I self-splicing intron P4-P6 domain mutant A125U/G126U”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #146136 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6D8M
- Type
- RNA
- Length
- 317 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 158 | — | — |
| B | — | rna | 159 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 23 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D8M · Group I self-splicing intron P4-P6 domain mutant A125U/G126U · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6D8M · PDBe 6D8M
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