MolNFT v1 · #145968 · protein
FT_T dioxygenase holoenzyme
6D3J: “FT_T dioxygenase holoenzyme”. X-ray diffraction, 2 ligands (AKG, CO), 2 pockets (best druggability 0.57). MolNFT v1 #145968 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6D3J
- Type
- protein
- Length
- 247 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- FT_T dioxygenase
- Ligands
- AKG, CO
- Pockets
- 2 · best druggability 0.57
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | FT_T dioxygenase | protein | 247 | 22% helix, 30% strand | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 244 | 0.57 | 0.78 | 25 | CO, AKG |
| 2 | 94 | 0.48 | 0.81 | 23 | empty |
Compared structures
- 6D3J · FT_T dioxygenase holoenzyme · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6D3J · PDBe 6D3J
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.