MolNFT v1 · #145871 · protein
1.88 ångström resolution crystal structure of quercetin 2,3- dioxygenase from acinetobacter baumannii
6D0P: “1.88 ångström resolution crystal structure of quercetin 2,3- dioxygenase from acinetobacter baumannii”. X-ray diffraction, 3 ligands (MN, MG, CL). MolNFT v1 #145871 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6D0P
- Type
- protein
- Length
- 1,152 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0C0C2K2
- Ligands
- MN, MG, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 288 | — | A0A0C0C2K2 |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 4 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · 2 copies · chains B, D
- PEG · Di(hydroxyethyl)ether · additive · 4 copies · chains A, B, C
- PG4 · Tetraethylene glycol · additive · 3 copies · chains A, B, D
- GOL · Glycerol · additive · 2 copies · chains C
- EDO · 1,2-ethanediol · additive · chains B
- PGE · Triethylene glycol · additive · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D0P · 1.88 Angstrom Resolution Crystal Structure of Quercetin 2,3-dioxygenase from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0C0C2K2
- Elsewhere: RCSB PDB 6D0P · PDBe 6D0P · UniProt A0A0C0C2K2
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