MolNFT v1 · #145827 · protein
Structure of a redesigned beta barrel, B11L5F_LGL
6CZG: “Structure of a redesigned beta barrel, B11L5F_LGL”. X-ray diffraction, 3 pockets (best druggability 0.67). MolNFT v1 #145827 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CZG
- Type
- protein
- Length
- 228 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- B11L5F_LGL
- Pockets
- 3 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 68% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | B11L5F_LGL | protein | 114 | 7% helix, 68% strand | — |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.67 | 0.84 | 26 | empty |
| 2 | 239 | 0.65 | 0.83 | 28 | empty |
| 3 | 173 | 0.45 | 0.75 | 28 | empty |
Interfaces
1 interface between chains.
- A–B · 364 Ų buried · 1 hydrogen bond · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6CZG · Structure of a redesigned beta barrel, b11L5F_LGL · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6CZG · PDBe 6CZG
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