MolNFT v1 · #145168 · protein
Covalently crosslinked trimer of a macrocyclic peptide derived from abeta (17-36) - (ORN)LCVFFCED(ORN)AII(2-NITROBENZYLGLYCINE)L(ORN)V
6CG5 · Orn-cys-val-phe-phe-cys-glu-asp-orn-ala-ile-ile-ezy-leu…: “Covalently crosslinked trimer of a macrocyclic peptide derived from abeta (17-36)…”. X-ray diffraction. MolNFT v1 #145168 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6CG5
- Type
- protein
- Length
- 48 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Orn-cys-val-phe-phe-cys-glu-asp-orn-ala-ile-ile-ezy-leu- orn-val
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 69% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | Orn-cys-val-phe-phe-cys-glu-asp-orn-ala-ile-ile-ezy-leu- orn-val | protein | 16 | 0% helix, 69% strand | — |
Interfaces
3 interfaces between chains.
- B–C · 200 Ų buried · 3 hydrogen bonds · protein-protein
- A–C · 198 Ų buried · 2 hydrogen bonds · protein-protein
- A–B · 195 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 12 modified, 3 disulfide (nonstandard, disulfide).
Compared structures
- 6CG5 · Covalently crosslinked trimer of a macrocyclic peptide derived from Abeta (17-36)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6CG5 · PDBe 6CG5
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