MolNFT v1 · #145146 · protein
Crystal structure of the A/VIETNAM/1203/2004 (H5N1) influenza virus hemagglutinin in complex with small molecule JNJ4796
6CFG: “Crystal structure of the A/VIETNAM/1203/2004 (H5N1) influenza virus hemagglutinin in complex with small…”. X-ray diffraction, 2 ligands (EZ7, NAG). MolNFT v1 #145146 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CFG
- Type
- protein
- Length
- 500 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5EP31, Q6DQ18
- Ligands
- EZ7, NAG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 324 | — | Q5EP31 |
| B | — | protein | 176 | — | Q6DQ18 |
Ligands and binding sites
- EZ7 · N-[2-(2-{4-[(R)-(2-methyl-2H-tetrazol-5-yl)(phenyl) methyl]piperazine-1-carbonyl}pyridin-4-yl)-1,3-benzoxazol-5-yl]acetamide · ligand · chains A, B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CFG · Crystal structure of the A/Vietnam/1203/2004 (H5N1) influenza virus hemagglutinin in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5EP31
- Every structure of UniProt Q6DQ18
- Elsewhere: RCSB PDB 6CFG · PDBe 6CFG · UniProt Q5EP31 · UniProt Q6DQ18
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