MolNFT v1 · #145014 · protein
Crystal structure of DH270.3 Fab in complex with MAN9
6CBJ: “Crystal structure of DH270.3 Fab in complex with MAN9”. X-ray diffraction, 4 ligands (MAN, NAG, BMA). MolNFT v1 #145014 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CBJ
- Type
- protein
- Length
- 436 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- S6C4S0, Q6PJG0
- Ligands
- MAN, NAG, BMA, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 224 | — | S6C4S0 |
| L | — | protein | 212 | — | Q6PJG0 |
Ligands and binding sites
- MAN · alpha-D-mannopyranose · sugar · 8 copies · chains H, L
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains H
- BMA · beta-D-mannopyranose · sugar · chains H
- PO4 · Phosphate ion · ion · chains H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CBJ · Crystal Structure of DH270.3 Fab in complex with Man9 · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt S6C4S0
- Every structure of UniProt Q6PJG0
- Elsewhere: RCSB PDB 6CBJ · PDBe 6CBJ · UniProt S6C4S0 · UniProt Q6PJG0
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