MolNFT v1 · #144981 · protein
High resolution structure of concanavalin B from jack bean (canavalia ensiformis), a chitinase-like protein
6CAF: “High resolution structure of concanavalin B from jack bean (canavalia ensiformis), a chitinase-like protein”. X-ray diffraction, 2 pockets (best druggability 0.49). MolNFT v1 #144981 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6CAF
- Type
- protein
- Length
- 288 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Concanavalin B
- UniProt
- P49347
- Pockets
- 2 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Concanavalin B | protein | 288 | 37% helix, 22% strand | P49347 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.49 | 0.82 | 18 | empty |
| 2 | 82 | 0.33 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 6CAF · High Resolution Structure of Concanavalin B from Jack Bean (Canavalia ensiformis), A… · the same entry in another collection · chain A against A, TM-score 1.00
- P49347 · AlphaFold monomer V2.0 prediction for concanavalin B (P49347) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49347
- Elsewhere: RCSB PDB 6CAF · PDBe 6CAF · UniProt P49347
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