MolNFT v1 · #144912 · protein

Crystal structure of transient receptor potential (TRP) channel TRPV4 in the presence of barium

6C8G · Transient receptor potential cation channel, subfamily V…: “Crystal structure of transient receptor potential (TRP) channel TRPV4 in the presence of barium”. X-ray diffraction, 1 ligand (BA), 9 pockets (best druggability 0.65).…

PDB: 6C8G
Type: protein
Length: 608 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transient receptor potential cation channel, subfamily V, member 4
UniProt: F7BWY7
Ligands: BA
Pockets: 9 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 54% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transient receptor potential cation channel, subfamily V, member 4	protein	608	54% helix, 4% strand	F7BWY7

Ligands and binding sites

BA · Barium ion · metal

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.65	0.93	17	empty
2	83	0.62	0.89	19	empty
3	154	0.61	0.83	20	empty
4	317	0.56	0.75	24	empty
5	122	0.49	0.80	18	empty

Compared structures

6C8G · Crystal structure of Transient Receptor Potential (TRP) channel TRPV4 in the presence of… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt F7BWY7
Elsewhere: RCSB PDB 6C8G · PDBe 6C8G · UniProt F7BWY7

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