MolNFT v1 · #144573 · protein

Crystal structure of toxoplasma gondii mitochondrial association factor 1 B (MAF1B)

6BXR: “Crystal structure of toxoplasma gondii mitochondrial association factor 1 B (MAF1B)”. X-ray diffraction, 2 ligands (NA, BR), 1 pocket (best druggability 0.62). MolNFT v1 #144573 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 6BXR
Type: protein
Length: 273 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mitochondrial association factor 1
UniProt: A0A140H546
Ligands: NA, BR
Pockets: 1 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Mitochondrial association factor 1	protein	273	44% helix, 16% strand	A0A140H546

Ligands and binding sites

NA · Sodium ion · metal · 3 copies · chains A
BR · Bromide ion · ion · 11 copies · chains A
GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	341	0.62	0.78	46	BR, NA, GOL

Compared structures

6BXR · Crystal structure of Toxoplasma gondii Mitochondrial Association Factor 1 B (MAF1B) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A140H546
Elsewhere: RCSB PDB 6BXR · PDBe 6BXR · UniProt A0A140H546

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