MolNFT v1 · #144427 · protein
Crystal structure of the slh domain of sap from bacillus anthracis in complex with a pyruvylated scwp unit
6BT4 · S-layer protein sap: “Crystal structure of the slh domain of sap from bacillus anthracis in complex with a pyruvylated scwp unit”. X-ray diffraction, 2 ligands (KPM, SO4), 2 pockets (best druggability 0.42). MolNFT v1 #144427 on…
- PDB
- 6BT4
- Type
- protein
- Length
- 165 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- S-layer protein sap
- UniProt
- P49051
- Ligands
- KPM, SO4
- Pockets
- 2 · best druggability 0.42
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | S-layer protein sap | protein | 165 | 45% helix, 4% strand | P49051 |
Ligands and binding sites
- KPM · 2-(acetylamino)-4-O-{2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranosyl}-2-deoxy-beta-D-glucopyranose · ligand · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 83 | 0.42 | 0.79 | 18 | KPM |
| 2 | 57 | 0.30 | 0.75 | 15 | SO4 |
Compared structures
- 6BT4 · Crystal structure of the SLH domain of Sap from Bacillus anthracis in complex with a… · the same entry in another collection · chain A against A, TM-score 1.00
- P49051 · AlphaFold monomer V2.0 prediction for S-layer protein sap (P49051) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49051
- Elsewhere: RCSB PDB 6BT4 · PDBe 6BT4 · UniProt P49051
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