MolNFT v1 · #144136 · protein
Structure of hepatitis C virus envelope glycoprotein E2 core from genotype 6A bound to broadly neutralizing antibody AR3D
6BKD: “Structure of hepatitis C virus envelope glycoprotein E2 core from genotype 6A bound to broadly neutralizing…”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #144136 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6BKD
- Type
- protein
- Length
- 580 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B9V0E2, S6B2A6, Q6PIL8
- Ligands
- NAG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | — | protein | 150 | — | B9V0E2 |
| H | — | protein | 223 | — | S6B2A6 |
| L | — | protein | 207 | — | Q6PIL8 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6BKD · Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to… · the same entry in another collection · chain E against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9V0E2
- Every structure of UniProt S6B2A6
- Every structure of UniProt Q6PIL8
- Elsewhere: RCSB PDB 6BKD · PDBe 6BKD · UniProt B9V0E2 · UniProt S6B2A6 · UniProt Q6PIL8
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