MolNFT v1 · #144129 · protein
Crystal structure of hendra virus matrix protein
6BK6: “Crystal structure of hendra virus matrix protein”. X-ray diffraction, 4 pockets (best druggability 0.64). MolNFT v1 #144129 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6BK6
- Type
- protein
- Length
- 280 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hendra virus matrix protein
- UniProt
- F4YH69
- Pockets
- 4 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hendra virus matrix protein | protein | 280 | 22% helix, 43% strand | F4YH69 |
Ligands and binding sites
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 170 | 0.64 | 0.85 | 25 | empty |
| 2 | 182 | 0.47 | 0.75 | 23 | empty |
| 3 | 85 | 0.36 | 0.76 | 21 | empty |
| 4 | 65 | 0.34 | 0.76 | 20 | empty |
Modifications
Observed in the structure: 1 modified (artifact).
Compared structures
- 6BK6 · Crystal structure of Hendra virus matrix protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F4YH69
- Elsewhere: RCSB PDB 6BK6 · PDBe 6BK6 · UniProt F4YH69
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