MolNFT v1 · #144051 · protein

HIV-1 ca hexamer in complex with IP6, hexagonal crystal form

6BHS · Capsid protein P24: “HIV-1 ca hexamer in complex with IP6, hexagonal crystal form”. X-ray diffraction, 1 ligand (IHP), 1 pocket (best druggability 0.32). MolNFT v1 #144051 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 6BHS
Type: protein
Length: 207 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Capsid protein P24
UniProt: P12493
Ligands: IHP
Pockets: 1 · best druggability 0.32

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Capsid protein P24	protein	207	60% helix, 3% strand	P12493

Ligands and binding sites

IHP · Inositol hexakisphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.32	0.78	15	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

6BHS · HIV-1 CA hexamer in complex with IP6, hexagonal crystal form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P12493
Elsewhere: RCSB PDB 6BHS · PDBe 6BHS · UniProt P12493

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