MolNFT v1 · #143764 · protein
Crystal structure of PDE2 in complex with complex 9
6B97: “Crystal structure of PDE2 in complex with complex 9”. X-ray diffraction, 3 ligands (CZY, ZN, MG). MolNFT v1 #143764 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6B97
- Type
- protein
- Length
- 691 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O00408
- Ligands
- CZY, ZN, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 343 | — | O00408 |
| B | — | protein | 348 | — | O00408 |
Ligands and binding sites
- CZY · 6-chloro-1-methyl-N-{(1R)-1-[4-(trifluoromethyl) phenyl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-4-amine · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6B97 · Crystal structure of PDE2 in complex with complex 9 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00408
- Elsewhere: RCSB PDB 6B97 · PDBe 6B97 · UniProt O00408
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