MolNFT v1 · #143663 · protein

Beta-lactamase, 500MS timepoint, mixed, shards crystal form

6B69: “Beta-lactamase, 500MS timepoint, mixed, shards crystal form”. X-ray diffraction, 2 ligands (9F2, PO4). MolNFT v1 #143663 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6B69
Type: protein
Length: 1,062 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P9WKD3
Ligands: 9F2, PO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	265	—	P9WKD3
B, D	—	protein	266	—	P9WKD3

Ligands and binding sites

9F2 · Ceftriaxone · ligand · 4 copies · chains A, B, C, D
PO4 · Phosphate ion · ion · 2 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6B69 · Beta-Lactamase, 500ms timepoint, mixed, shards crystal form · the same entry in another collection · chain C against C, TM-score 1.00
P9WKD3 · AlphaFold monomer V2.0 prediction for beta-lactamase (P9WKD3) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P9WKD3
Elsewhere: RCSB PDB 6B69 · PDBe 6B69 · UniProt P9WKD3

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