MolNFT v1 · #143350 · protein
Structure of pr-10 allergen from peanut (ara H 8.01).
6AWZ · Ara H 8 allergen: “Structure of pr-10 allergen from peanut (ara H 8.01).”. X-ray diffraction, 1 ligand (NA), 2 pockets (best druggability 0.72). MolNFT v1 #143350 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6AWZ
- Type
- protein
- Length
- 312 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ara H 8 allergen
- UniProt
- Q6VT83
- Ligands
- NA
- Pockets
- 2 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Ara H 8 allergen | protein | 156 | 28% helix, 46% strand | Q6VT83 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 388 | 0.72 | 0.83 | 50 | PG4 |
| 2 | 424 | 0.71 | 0.82 | 58 | empty |
Interfaces
1 interface between chains.
- A–B · 662 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 6AWZ · Structure of PR-10 allergen from peanut (Ara h 8.01). · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6VT83
- Elsewhere: RCSB PDB 6AWZ · PDBe 6AWZ · UniProt Q6VT83
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