MolNFT v1 · #143349 · protein
Structure of peanut allergen ara H 8.01.
6AWY · Ara H 8 allergen: “Structure of peanut allergen ara H 8.01.”. X-ray diffraction, 2 ligands (NA, SO4), 3 pockets (best druggability 0.79). MolNFT v1 #143349 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6AWY
- Type
- protein
- Length
- 312 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ara H 8 allergen
- UniProt
- Q6VT83
- Ligands
- NA, SO4
- Pockets
- 3 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Ara H 8 allergen | protein | 156 | 28% helix, 46% strand | Q6VT83 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 303 | 0.79 | 0.90 | 42 | SO4 |
| 2 | 569 | 0.75 | 0.82 | 51 | SO4 |
| 3 | 161 | 0.44 | 0.75 | 31 | empty |
Interfaces
1 interface between chains.
- A–B · 739 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 6AWY · Structure of peanut allergen Ara h 8.01. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6VT83
- Elsewhere: RCSB PDB 6AWY · PDBe 6AWY · UniProt Q6VT83
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